MLOC_64743 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.916728.607526.954127.2945
LEAShoots from the seedlings (10 cm shoot stage)23.195323.837727.01421.5162
INF1Young developing inflorescences (5mm)16.235417.846717.596715.0331
INF2Developing inflorescences (1-1.5 cm)13.620216.342713.990216.6419
ROORoots from the seedlings (10 cm shoot stage)17.777721.670215.406225.3211
NODDeveloping tillers at six leaf stage, 3rd internode27.290430.733339.1996103.963
CAR5Developing grain, bracts removed (5 DPA)19.54418.071818.887818.6673
CAR15Developing grain, bracts removed (15 DPA)9.544228.780119.309422.0604



CDS Structure of MLOC_64743






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64743.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361419NoneNoneNoneNone
MLOC_64743.1CUST_5034_PI427708080AvailableAvailablecontig_49260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43910.1 +3 0.0 788 441/613 (72%) 13101.m04547 protein CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
TAIR PP10 AT2G42880.1 +3 0.0 708 347/418 (83%) | Symbols: ATMPK20, MPK20 | MAP kinase 20 | chr2:17840572-17843947 REVERSE LENGTH=606