- Predicted Gene MLOC_64727
MLOC_64727 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.441 | 15.2148 | 14.411 | 13.6007 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.8999 | 3.56625 | 5.36155 | 6.90519 |
INF1 | Young developing inflorescences (5mm) | 10.8087 | 10.2115 | 9.69905 | 8.6402 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.2769 | 8.49326 | 8.23142 | 8.82357 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.9253 | 13.0437 | 10.2111 | 14.6189 |
NOD | Developing tillers at six leaf stage, 3rd internode | 188.951 | 133.144 | 89.9824 | 385.787 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.0334 | 10.563 | 10.1074 | 10.0011 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.6031 | 1.12056 | 1.35093 | 3.22071 |
CDS Structure of MLOC_64727
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64727.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
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Rice PP6 |
LOC_Os01g50010.1 |
+3 |
0.0 |
865 |
476/570 (84%) |
13101.m05205 protein clathrin assembly protein, putative, expressed |
TAIR PP10 |
AT2G01600.1 |
+3 |
0.0 |
616 |
349/576 (61%) |
ENTH/ANTH/VHS superfamily protein | chr2:268975-272356 FORWARD LENGTH=571 |