MLOC_64727 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.44115.214814.41113.6007
LEAShoots from the seedlings (10 cm shoot stage)14.89993.566255.361556.90519
INF1Young developing inflorescences (5mm)10.808710.21159.699058.6402
INF2Developing inflorescences (1-1.5 cm)7.27698.493268.231428.82357
ROORoots from the seedlings (10 cm shoot stage)10.925313.043710.211114.6189
NODDeveloping tillers at six leaf stage, 3rd internode188.951133.14489.9824385.787
CAR5Developing grain, bracts removed (5 DPA)10.033410.56310.107410.0011
CAR15Developing grain, bracts removed (15 DPA)1.60311.120561.350933.22071



CDS Structure of MLOC_64727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64727.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374852NoneNoneNoneNone
MLOC_64727.3CUST_5028_PI427708080AvailableAvailablecontig_49244 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50010.1 +3 0.0 865 476/570 (84%) 13101.m05205 protein clathrin assembly protein, putative, expressed
TAIR PP10 AT2G01600.1 +3 0.0 616 349/576 (61%) ENTH/ANTH/VHS superfamily protein | chr2:268975-272356 FORWARD LENGTH=571