MLOC_64710 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.428930.786128.379133.4515
LEAShoots from the seedlings (10 cm shoot stage)27.909721.553224.299920.7703
INF1Young developing inflorescences (5mm)62.098963.385257.966956.681
INF2Developing inflorescences (1-1.5 cm)68.902362.595361.372575.6387
ROORoots from the seedlings (10 cm shoot stage)28.836931.986730.457638.9549
NODDeveloping tillers at six leaf stage, 3rd internode10.432416.007322.470552.2267
CAR5Developing grain, bracts removed (5 DPA)45.320346.036345.292448.4379
CAR15Developing grain, bracts removed (15 DPA)16.328915.0516.036739.9727



CDS Structure of MLOC_64710






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64710.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250640.1NoneNoneNoneNone
MLOC_64710.1CUST_5023_PI427708080AvailableAvailablecontig_49221 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g39720.6 +2 7e-49 170 92/105 (88%) 13102.m04411 protein splicing factor, arginine/serine-rich 7, putative, expressed
TAIR PP10 AT2G24590.1 +2 2e-41 149 76/112 (68%) | Symbols: RSZ22a, At-RSZ22a | RNA recognition motif and CCHC-type zinc finger domains containing protein | chr2:10449837-10450860 FORWARD LENGTH=196