MLOC_64686 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.14054.036694.640434.22855
LEAShoots from the seedlings (10 cm shoot stage)6.17820.421771.065342.00169
INF1Young developing inflorescences (5mm)10.695711.14998.069939.19039
INF2Developing inflorescences (1-1.5 cm)5.512985.018784.365685.99106
ROORoots from the seedlings (10 cm shoot stage)4.338323.861674.825284.26097
NODDeveloping tillers at six leaf stage, 3rd internode1.29232.282491.138334.79257
CAR5Developing grain, bracts removed (5 DPA)13.168213.586313.703414.2458
CAR15Developing grain, bracts removed (15 DPA)2.79511.082072.442295.27406



CDS Structure of MLOC_64686






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64686.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372633NoneNoneNoneNone
MLOC_64686.1CUST_18299_PI427708080AvailableAvailablecontig_49190 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38080.1 -2 0.0 1297 656/735 (89%) 13110.m03473 protein OsSub61 - Putative Subtilisin homologue, expressed
TAIR PP10 AT1G04110.1 -2 1e-169 522 333/760 (44%) | Symbols: SDD1 | Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=775