MLOC_64633 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.299331.751112.061142.16018
LEAShoots from the seedlings (10 cm shoot stage)4.42130.7590142.559212.1051
INF1Young developing inflorescences (5mm)1.911062.483372.182252.31658
INF2Developing inflorescences (1-1.5 cm)3.369672.677052.590623.87826
ROORoots from the seedlings (10 cm shoot stage)8.620975.618896.310547.38428
NODDeveloping tillers at six leaf stage, 3rd internode31.924937.67156.4031182.1608
CAR5Developing grain, bracts removed (5 DPA)3.757835.541654.5325.86801
CAR15Developing grain, bracts removed (15 DPA)16.220917.542618.505451.6057



CDS Structure of MLOC_64633






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64633.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64633.2CUST_14724_PI427708080AvailableAvailablecontig_49116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32290.2 -1 0.0 547 309/405 (76%) 13109.m07548 protein FAD dependent oxidoreductase domain containing protein, expressed
TAIR PP10 AT2G24580.1 -1 3e-133 398 225/414 (54%) FAD-dependent oxidoreductase family protein | chr2:10444928-10446178 REVERSE LENGTH=416