- Predicted Gene MLOC_64632
MLOC_64632 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.47049 | 6.6001 | 7.55467 | 7.64883 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.19013 | 2.38584 | 4.21522 | 2.89534 |
INF1 | Young developing inflorescences (5mm) | 4.52071 | 4.79082 | 5.16962 | 4.1095 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.38635 | 4.23502 | 4.98049 | 4.93561 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.34685 | 5.19733 | 5.6862 | 6.67622 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.57422 | 4.63508 | 4.31794 | 15.3795 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.9551 | 6.63749 | 5.73424 | 6.17769 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.54834 | 2.76322 | 2.52851 | 7.20511 |
CDS Structure of MLOC_64632
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64632.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g29220.1 |
+2 |
3e-37 |
140 |
118/183 (64%) |
13102.m03184 protein expressed protein |
TAIR PP10 |
AT4G17010.1 |
+2 |
2e-19 |
87 |
55/96 (57%) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:9576442-9577627 FORWARD LENGTH=160 |