MLOC_64612 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3510890.365650.4049610.360375
LEAShoots from the seedlings (10 cm shoot stage)0.5231980.5289470.4428120.372092
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0218082000.0273563
ROORoots from the seedlings (10 cm shoot stage)2.054210.6669020.6694120.829116
NODDeveloping tillers at six leaf stage, 3rd internode2.654063.388434.494588.86261
CAR5Developing grain, bracts removed (5 DPA)0.05610010.1354480.05205330.0837467
CAR15Developing grain, bracts removed (15 DPA)0.01718510.02082410.0246140.0540468



CDS Structure of MLOC_64612






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64612.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374973NoneNoneNoneNone
MLOC_64612.1CUST_5004_PI427708080AvailableAvailablecontig_49081 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g17410.1 +2 2e-76 249 164/309 (53%) 13106.m01914 protein dof zinc finger domain containing protein, putative, expressed
TAIR PP10 AT3G21270.1 +2 1e-31 123 54/79 (68%) | Symbols: ADOF2, DOF2 | DOF zinc finger protein 2 | chr3:7474934-7475548 FORWARD LENGTH=204