MLOC_64607 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.165516.744316.241214.4069
LEAShoots from the seedlings (10 cm shoot stage)13.69616.614838.738488.17744
INF1Young developing inflorescences (5mm)14.869213.29714.154710.5838
INF2Developing inflorescences (1-1.5 cm)13.260214.807814.139513.8375
ROORoots from the seedlings (10 cm shoot stage)7.0991913.784513.154514.0039
NODDeveloping tillers at six leaf stage, 3rd internode10.437810.47668.620934.0561
CAR5Developing grain, bracts removed (5 DPA)16.082116.562316.915414.2607
CAR15Developing grain, bracts removed (15 DPA)3.867033.723114.484157.74544



CDS Structure of MLOC_64607






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64607.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362237NoneNoneNoneNone
MLOC_64607.5CUST_5003_PI427708080AvailableAvailablecontig_49068 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g23440.1 -3 0.0 1140 617/657 (94%) 13108.m02401 protein amino acid permease family protein, putative, expressed
TAIR PP10 AT1G30450.2 -3 0.0 1014 534/656 (81%) | Symbols: CCC1, ATCCC1, HAP5 | cation-chloride co-transporter 1 | chr1:10762905-10769061 FORWARD LENGTH=975