- Predicted Gene MLOC_64602
MLOC_64602 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.13317 | 12.0477 | 10.3611 | 8.87562 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.70593 | 6.04693 | 4.61999 | 4.70547 |
INF1 | Young developing inflorescences (5mm) | 46.0102 | 45.8456 | 39.392 | 34.9587 |
INF2 | Developing inflorescences (1-1.5 cm) | 45.9224 | 50.0723 | 40.732 | 48.1471 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.87241 | 7.63849 | 4.69118 | 7.5648 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.41446 | 1.63136 | 4.56474 | 6.3927 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.4589 | 11.6332 | 11.2589 | 10.8142 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.009 | 2.75887 | 3.11515 | 6.37455 |
CDS Structure of MLOC_64602
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64602.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g08330.1 |
-1 |
0.0 |
1290 |
696/748 (93%) |
13111.m00877 protein POLD1 - Putative DNA polymerase delta catalytic subunit, expressed |
TAIR PP10 |
AT5G63960.1 |
-1 |
0.0 |
1113 |
595/749 (79%) |
DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases | chr5:25599597-25606672 FORWARD LENGTH=1095 |