MLOC_64602 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.1331712.047710.36118.87562
LEAShoots from the seedlings (10 cm shoot stage)6.705936.046934.619994.70547
INF1Young developing inflorescences (5mm)46.010245.845639.39234.9587
INF2Developing inflorescences (1-1.5 cm)45.922450.072340.73248.1471
ROORoots from the seedlings (10 cm shoot stage)3.872417.638494.691187.5648
NODDeveloping tillers at six leaf stage, 3rd internode1.414461.631364.564746.3927
CAR5Developing grain, bracts removed (5 DPA)12.458911.633211.258910.8142
CAR15Developing grain, bracts removed (15 DPA)3.0092.758873.115156.37455



CDS Structure of MLOC_64602






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64602.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64602.2CUST_14719_PI427708080AvailableAvailablecontig_49063 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g08330.1 -1 0.0 1290 696/748 (93%) 13111.m00877 protein POLD1 - Putative DNA polymerase delta catalytic subunit, expressed
TAIR PP10 AT5G63960.1 -1 0.0 1113 595/749 (79%) DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases | chr5:25599597-25606672 FORWARD LENGTH=1095