MLOC_64595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.9304041.387730.9590240.891316
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_64595






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64595.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64595.1CUST_8741_PI427708083AvailableAvailablecontig_49044 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g41960.1 -2 7e-17 79 35/68 (51%) 13101.m04307 protein retrotransposon protein, putative, unclassified
TAIR PP10 AT2G34930.1 -2 4e-12 63 27/58 (47%) disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905