- Predicted Gene MLOC_64588
MLOC_64588 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_64588_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_64588_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 34.5828 | 49.5139 | 40.7859 | 47.8641 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.4892 | 1.82906 | 1.53325 | 6.54018 |
INF1 | Young developing inflorescences (5mm) | 247.702 | 264.478 | 273.316 | 233.723 |
INF2 | Developing inflorescences (1-1.5 cm) | 244.968 | 274.432 | 212.875 | 297.812 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.0804 | 31.2425 | 27.7767 | 38.1251 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.25224 | 0.419146 | 0.19653 | 1.33103 |
CAR5 | Developing grain, bracts removed (5 DPA) | 28.4883 | 30.4666 | 28.3352 | 31.6748 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.84023 | 3.29301 | 5.60338 | 11.8106 |
CDS Structure of MLOC_64588
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64588.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g51230.2 |
-1 |
0.0 |
1136 |
590/792 (74%) |
13103.m05570 protein SNF2 family N-terminal domain containing protein, expressed |
TAIR PP10 |
AT5G66750.1 |
-1 |
0.0 |
910 |
480/763 (63%) |
| Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 | chromatin remodeling 1 | chr5:26649050-26652869 FORWARD LENGTH=764 |