- Predicted Gene MLOC_64577
MLOC_64577 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0689858 | 0.108284 | 0.114934 | 0.0868345 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0550795 | 0.0282371 | 0.0245457 | 0.0285476 |
| INF1 | Young developing inflorescences (5mm) | 0.207372 | 0.250551 | 0.151289 | 0.156876 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.199121 | 0.266346 | 0.179223 | 0.220081 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0342448 | 0.104695 | 0.034212 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.013638 | 0.00851973 | 0.0140969 | 0.0262724 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.142832 | 0.11447 | 0.138074 | 0.112461 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0665988 | 0.0852453 | 0.098296 | 0.163435 |
CDS Structure of MLOC_64577
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64577.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37170.1 |
+3 |
4e-26 |
100 |
54/150 (36%) |
13110.m03370 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
ATMG00310.1 |
+3 |
7e-15 |
76 |
39/140 (28%) |
| Symbols: ORF154 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chrM:90883-91347 REVERSE LENGTH=154 |