MLOC_64555 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains105.254195.451179.268175.006
LEAShoots from the seedlings (10 cm shoot stage)194.53873.002576.2129106.149
INF1Young developing inflorescences (5mm)81.219781.657978.11369.612
INF2Developing inflorescences (1-1.5 cm)66.946271.093766.137675.3143
ROORoots from the seedlings (10 cm shoot stage)101.574153.468103.956177.166
NODDeveloping tillers at six leaf stage, 3rd internode230.434204.403194.174677.335
CAR5Developing grain, bracts removed (5 DPA)140.907126.103144.427132.561
CAR15Developing grain, bracts removed (15 DPA)43.701440.301440.867295.4542



CDS Structure of MLOC_64555






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64555.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357056CUST_23982_PI427708080NoneNoneNone
MLOC_64555.1CUST_18298_PI427708080AvailableAvailablecontig_48990 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g08370.1 -3 0.0 1935 996/1048 (95%) 13105.m00920 protein CESA1 - cellulose synthase, expressed
TAIR PP10 AT4G32410.1 -3 0.0 1683 834/1048 (80%) | Symbols: CESA1, RSW1, AtCESA1 | cellulose synthase 1 | chr4:15641009-15646388 REVERSE LENGTH=1081