MLOC_64544 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains123.13991.5883102.86101.522
LEAShoots from the seedlings (10 cm shoot stage)14.81636.379793.719136.85071
INF1Young developing inflorescences (5mm)6.7161711.97879.070918.32394
INF2Developing inflorescences (1-1.5 cm)3.256811.180731.940722.30335
ROORoots from the seedlings (10 cm shoot stage)301.891243.827266.436295.649
NODDeveloping tillers at six leaf stage, 3rd internode650.241412.486253.4151089.53
CAR5Developing grain, bracts removed (5 DPA)3.148861.990742.977582.717
CAR15Developing grain, bracts removed (15 DPA)18.600217.21636.5815938.4978



CDS Structure of MLOC_64544






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64544.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64544.1CUST_14712_PI427708080AvailableAvailablecontig_48980 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g47700.1 +1 2e-37 130 59/72 (82%) 13105.m05055 protein LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT3G18280.1 +1 5e-25 97 37/71 (52%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:6267102-6267392 FORWARD LENGTH=96