MLOC_64541 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains134.836101.088100.569117.506
LEAShoots from the seedlings (10 cm shoot stage)113.422166.849155.313129.345
INF1Young developing inflorescences (5mm)0.4434360.3286340.2027440.308392
INF2Developing inflorescences (1-1.5 cm)0.5038320.1835690.7866170.533763
ROORoots from the seedlings (10 cm shoot stage)206.975180.44132.179224.401
NODDeveloping tillers at six leaf stage, 3rd internode50.534743.5971.49742101.413
CAR5Developing grain, bracts removed (5 DPA)112.767100.862119.494123.64
CAR15Developing grain, bracts removed (15 DPA)3.313432.571153.245937.85135



CDS Structure of MLOC_64541






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64541.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252731.1NoneNoneNoneNone
MLOC_64541.1CUST_18297_PI427708080AvailableAvailablecontig_48973 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51080.1 +3 0.0 872 424/481 (88%) 13103.m05554 protein glutamate decarboxylase, putative, expressed
TAIR PP10 AT5G17330.1 +3 0.0 837 409/486 (84%) | Symbols: GAD, GAD1 | glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502