MLOC_64527 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.141690.6476660.6329450.687603
LEAShoots from the seedlings (10 cm shoot stage)1.148690.8155770.3947510.592564
INF1Young developing inflorescences (5mm)7.7783712.872813.36949.65584
INF2Developing inflorescences (1-1.5 cm)8.560679.960658.331069.63216
ROORoots from the seedlings (10 cm shoot stage)5.498624.374974.108684.14436
NODDeveloping tillers at six leaf stage, 3rd internode11.087314.787124.739538.9369
CAR5Developing grain, bracts removed (5 DPA)3.129953.743192.227682.82183
CAR15Developing grain, bracts removed (15 DPA)3.611593.026222.751997.84958



CDS Structure of MLOC_64527






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64527.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64527.1CUST_14709_PI427708080AvailableAvailablecontig_48955 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g09020.1 +2 0.0 579 294/421 (70%) 13111.m00950 protein amino acid transporter, putative, expressed
TAIR PP10 AT1G77380.1 +2 3e-172 506 263/457 (58%) | Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476