MLOC_64521 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1321490.389530.3196480.339063
LEAShoots from the seedlings (10 cm shoot stage)0.7605580.7139320.6600490.578802
INF1Young developing inflorescences (5mm)0.2826480.2816340.241420.259868
INF2Developing inflorescences (1-1.5 cm)0.150860.2119870.315230.275446
ROORoots from the seedlings (10 cm shoot stage)0.1104740.08353880.08239210.104857
NODDeveloping tillers at six leaf stage, 3rd internode0.1871190.3373080.7497641.25545
CAR5Developing grain, bracts removed (5 DPA)0.3377250.3392680.3695750.391262
CAR15Developing grain, bracts removed (15 DPA)0.0104650.012652800.0400155



CDS Structure of MLOC_64521






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64521.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360313NoneNoneNoneNone
MLOC_64521.1CUST_4992_PI427708080AvailableAvailablecontig_48947 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g02850.1 +3 0.0 1166 641/820 (78%) 13104.m00203 protein pentatricopeptide, putative, expressed
TAIR PP10 AT3G57430.1 +3 0.0 819 431/777 (55%) | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890