MLOC_64503 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.612296.789476.347975.78365
LEAShoots from the seedlings (10 cm shoot stage)6.0964.677334.072093.92056
INF1Young developing inflorescences (5mm)9.638829.9613811.75267.88253
INF2Developing inflorescences (1-1.5 cm)13.438213.448215.005413.6346
ROORoots from the seedlings (10 cm shoot stage)5.29748.174457.124288.14292
NODDeveloping tillers at six leaf stage, 3rd internode6.189515.709666.2945717.2222
CAR5Developing grain, bracts removed (5 DPA)10.42399.110649.493638.30715
CAR15Developing grain, bracts removed (15 DPA)5.027023.905635.391529.93622



CDS Structure of MLOC_64503






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64503.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367818NoneNoneNoneNone
MLOC_64503.1CUST_4986_PI427708080AvailableAvailablecontig_48918 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g54040.3 -3 0.0 625 365/545 (67%) 13101.m05675 protein ATP-dependent protease La, putative, expressed
TAIR PP10 AT2G25740.1 -3 3e-120 377 208/494 (42%) ATP-dependent protease La (LON) domain protein | chr2:10980175-10983632 FORWARD LENGTH=547