MLOC_64502 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.630784.868465.647045.58278
LEAShoots from the seedlings (10 cm shoot stage)0.332130.06301890.1161220.14643
INF1Young developing inflorescences (5mm)0.08685460.132280.03955670.0833428
INF2Developing inflorescences (1-1.5 cm)0.07092680.027047900.0440946
ROORoots from the seedlings (10 cm shoot stage)5.5099517.68494.1490817.6474
NODDeveloping tillers at six leaf stage, 3rd internode00.006085170.04409680.0429508
CAR5Developing grain, bracts removed (5 DPA)0.3127220.5051320.4736960.468663
CAR15Developing grain, bracts removed (15 DPA)53.504854.608440.3746125.216



CDS Structure of MLOC_64502






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64502.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377113NoneNoneNoneNone
MLOC_64502.1CUST_4985_PI427708080AvailableAvailablecontig_48918 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g54030.1 +3 0.0 984 518/585 (89%) 13101.m05672 protein NADP-dependent malic enzyme, putative, expressed
TAIR PP10 AT2G19900.1 +3 0.0 850 441/567 (78%) | Symbols: ATNADP-ME1, NADP-ME1 | NADP-malic enzyme 1 | chr2:8592106-8595403 REVERSE LENGTH=581