MLOC_64491 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.241813.75112.968314.7698
LEAShoots from the seedlings (10 cm shoot stage)18.557910.59729.7401411.1119
INF1Young developing inflorescences (5mm)46.150942.486152.108843.2925
INF2Developing inflorescences (1-1.5 cm)75.461788.0974103.426103.979
ROORoots from the seedlings (10 cm shoot stage)12.554214.26714.912317.541
NODDeveloping tillers at six leaf stage, 3rd internode3.242194.346685.5254914.3278
CAR5Developing grain, bracts removed (5 DPA)10.91169.357179.5814710.7853
CAR15Developing grain, bracts removed (15 DPA)0.06692780.1121020.09405860.238658



CDS Structure of MLOC_64491






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64491.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353820NoneNoneNoneNone
MLOC_64491.2CUST_18296_PI427708080AvailableAvailablecontig_48895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g08230.2 +3 0.0 878 461/549 (84%) 13102.m00949 protein WAX2, putative, expressed
TAIR PP10 AT5G57800.1 +3 0.0 689 360/548 (66%) | Symbols: FLP1, YRE, CER3, WAX2 | Fatty acid hydroxylase superfamily | chr5:23420589-23423832 FORWARD LENGTH=632