MLOC_64486 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.126515.711218.076419.9717
LEAShoots from the seedlings (10 cm shoot stage)00.084561800
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.02845380.0102996
ROORoots from the seedlings (10 cm shoot stage)25.830419.58414.732322.7878
NODDeveloping tillers at six leaf stage, 3rd internode00.006015600.0110181
CAR5Developing grain, bracts removed (5 DPA)0.03497170.057624600.035225
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_64486






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64486.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362117NoneNoneNoneNone
MLOC_64486.1CUST_18295_PI427708080AvailableAvailablecontig_48895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g34630.1 -1 0.0 534 265/303 (87%) 13104.m03365 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G66390.1 -1 5e-143 418 204/301 (68%) Peroxidase superfamily protein | chr5:26516063-26517329 REVERSE LENGTH=336