MLOC_64485 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.220014.22285.37384.55537
LEAShoots from the seedlings (10 cm shoot stage)0.2531560.258330.1929130.196334
INF1Young developing inflorescences (5mm)0.1881330.1582270.1181920.142208
INF2Developing inflorescences (1-1.5 cm)0.1072670.1119380.1428960.142186
ROORoots from the seedlings (10 cm shoot stage)7.836882.670995.160624.06038
NODDeveloping tillers at six leaf stage, 3rd internode1.771121.610741.845944.61719
CAR5Developing grain, bracts removed (5 DPA)1.639221.492191.422281.55357
CAR15Developing grain, bracts removed (15 DPA)0.5142770.5648770.3238951.27236



CDS Structure of MLOC_64485






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64485.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360863NoneNoneNoneNone
MLOC_64485.2CUST_4982_PI427708080AvailableAvailablecontig_48895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g34630.1 -1 4e-141 233 116/139 (83%) 13104.m03365 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G66390.1 -1 5e-107 189 89/137 (65%) Peroxidase superfamily protein | chr5:26516063-26517329 REVERSE LENGTH=336