MLOC_64467 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8955841.116391.058221.20061
LEAShoots from the seedlings (10 cm shoot stage)0.4000020.437790.4243630.397791
INF1Young developing inflorescences (5mm)2.399892.024511.846191.97224
INF2Developing inflorescences (1-1.5 cm)1.649671.783521.343591.97156
ROORoots from the seedlings (10 cm shoot stage)0.7864350.8834930.8903451.22455
NODDeveloping tillers at six leaf stage, 3rd internode0.2625970.3674340.6634241.5327
CAR5Developing grain, bracts removed (5 DPA)2.286942.319872.481852.56686
CAR15Developing grain, bracts removed (15 DPA)0.3604430.2155210.1912960.694428



CDS Structure of MLOC_64467






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64467.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64467.1CUST_14699_PI427708080AvailableAvailablecontig_48867 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g01836.1 +3 0.0 1011 532/641 (83%) 13111.m00099 protein pentatricopeptide, putative, expressed
TAIR PP10 AT3G08820.1 +3 0.0 588 294/589 (50%) Pentatricopeptide repeat (PPR) superfamily protein | chr3:2677122-2679179 REVERSE LENGTH=685