MLOC_64453 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.93111.954251.48771.82202
LEAShoots from the seedlings (10 cm shoot stage)0.6895120.4938270.4442610.436956
INF1Young developing inflorescences (5mm)7.607426.901096.885266.37685
INF2Developing inflorescences (1-1.5 cm)4.941424.401973.083774.89173
ROORoots from the seedlings (10 cm shoot stage)0.9448591.357170.6973881.32881
NODDeveloping tillers at six leaf stage, 3rd internode0.8269050.5556990.3975661.33176
CAR5Developing grain, bracts removed (5 DPA)1.021381.025420.9577241.01209
CAR15Developing grain, bracts removed (15 DPA)0.01932080.04600500.109994



CDS Structure of MLOC_64453






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64453.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64453.1NoneAvailableAvailablecontig_48841 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g48510.1 +1 1e-71 233 156/235 (66%) 13104.m04940 protein growth regulating factor protein, putative, expressed
TAIR PP10 AT3G52910.1 +1 2e-29 120 68/134 (51%) | Symbols: AtGRF4, GRF4 | growth-regulating factor 4 | chr3:19616177-19618268 REVERSE LENGTH=380