MLOC_64446 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.930651.445731.827811.86722
LEAShoots from the seedlings (10 cm shoot stage)0.1125230.064163800.0781651
INF1Young developing inflorescences (5mm)0.1712890.3741330.3071980.295517
INF2Developing inflorescences (1-1.5 cm)0.2388520.1946280.1460150.252881
ROORoots from the seedlings (10 cm shoot stage)6.623263.586153.029365.13646
NODDeveloping tillers at six leaf stage, 3rd internode0.1713020.1827430.3241260.716476
CAR5Developing grain, bracts removed (5 DPA)0.017470.08265340.01722590.0534996
CAR15Developing grain, bracts removed (15 DPA)0.06588530.1948410.1723540.432516



CDS Structure of MLOC_64446






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64446.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368994NoneNoneNoneNone
MLOC_64446.1CUST_4975_PI427708080AvailableAvailablecontig_48830 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47060.1 +3 5e-114 358 276/512 (54%) 13102.m05292 protein OsWRKY66 - Superfamily of TFs having WRKY and zinc finger domains, expressed
TAIR PP10 AT2G34830.1 +3 1e-57 204 129/254 (51%) | Symbols: WRKY35, MEE24, AtWRKY35 | WRKY DNA-binding protein 35 | chr2:14693839-14696378 REVERSE LENGTH=427