- Predicted Gene MLOC_64437
MLOC_64437 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 30.0571 | 29.6838 | 28.0266 | 26.8762 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.2929 | 15.0491 | 22.0238 | 14.3186 |
| INF1 | Young developing inflorescences (5mm) | 22.4067 | 29.5741 | 29.6129 | 21.077 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.9665 | 26.4862 | 21.4981 | 24.3928 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 29.0217 | 30.665 | 22.3246 | 29.5412 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.8554 | 17.7789 | 17.6837 | 46.9482 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.1993 | 19.9558 | 18.2138 | 17.312 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.40494 | 2.1739 | 2.17365 | 5.14769 |
CDS Structure of MLOC_64437
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64437.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g57066.1 |
+3 |
0.0 |
659 |
365/414 (88%) |
13101.m06052 protein transmembrane protein 49, putative, expressed |
| TAIR PP10 |
AT4G14950.1 |
+3 |
4e-165 |
488 |
256/404 (63%) |
SNARE associated Golgi protein family | chr4:8545517-8547722 FORWARD LENGTH=416 |
