MLOC_6442 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.13661 | 2.88363 | 2.20985 | 2.52195 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.35277 | 0.84786 | 2.80574 | 1.35949 |
| INF1 | Young developing inflorescences (5mm) | 2.13064 | 2.55154 | 2.525 | 2.07883 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.39151 | 2.29587 | 2.53365 | 2.72493 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.82147 | 1.78764 | 1.67721 | 2.06296 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.16376 | 1.11354 | 1.22773 | 3.03576 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.83481 | 2.57663 | 1.9834 | 2.2132 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.980752 | 0.7883 | 0.87047 | 2.09972 |
CDS Structure of MLOC_6442
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6442.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g37430.2 |
-1 |
0.0 |
569 |
289/381 (76%) |
13106.m03873 protein expressed protein |
| TAIR PP10 |
AT2G45320.1 |
-1 |
7e-139 |
421 |
217/342 (63%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18684182-18686107 REVERSE LENGTH=392 |