- Predicted Gene MLOC_64401
MLOC_64401 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.91608 | 7.18577 | 7.18325 | 7.3897 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.1018 | 17.9287 | 18.6702 | 15.9449 |
| INF1 | Young developing inflorescences (5mm) | 8.95321 | 8.45249 | 7.76458 | 7.66116 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.70054 | 6.20215 | 6.64938 | 7.57283 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 37.9551 | 22.7789 | 25.1795 | 31.6479 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.8507 | 18.2791 | 13.3492 | 56.0456 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.97179 | 5.64309 | 5.01847 | 6.16507 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.81567 | 4.95388 | 3.98854 | 12.0321 |
CDS Structure of MLOC_64401
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64401.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g46700.3 |
-2 |
9e-153 |
441 |
222/239 (93%) |
13107.m04934 protein zinc finger, RING-type, putative, expressed |
| TAIR PP10 |
AT3G47160.1 |
-2 |
7e-103 |
312 |
158/241 (66%) |
RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=245 |
