MLOC_64395 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.960838.014388.276248.61668
LEAShoots from the seedlings (10 cm shoot stage)7.102086.031726.593615.99212
INF1Young developing inflorescences (5mm)5.301046.636426.990465.76993
INF2Developing inflorescences (1-1.5 cm)8.449888.002368.430749.59923
ROORoots from the seedlings (10 cm shoot stage)8.1983611.126410.244414.1954
NODDeveloping tillers at six leaf stage, 3rd internode6.818758.752397.6085630.3281
CAR5Developing grain, bracts removed (5 DPA)11.939712.974111.334312.7972
CAR15Developing grain, bracts removed (15 DPA)64.372876.574466.9501175.158



CDS Structure of MLOC_64395






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64395.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357911NoneNoneNoneNone
MLOC_64395.3CUST_18294_PI427708080AvailableAvailablecontig_48722 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g45470.1 -3 0.0 776 384/494 (78%) 13104.m04561 protein vacuolar-processing enzyme precursor, putative, expressed
TAIR PP10 AT1G62710.1 -3 0.0 629 312/487 (64%) | Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486