- Predicted Gene MLOC_64388
MLOC_64388 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.5484 | 29.8377 | 28.0454 | 23.9751 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 39.6558 | 36.982 | 45.6216 | 33.7884 |
| INF1 | Young developing inflorescences (5mm) | 9.9293 | 9.78425 | 10.8089 | 7.91177 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.1453 | 15.4875 | 21.5878 | 18.2924 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.5828 | 37.6948 | 31.9988 | 38.4537 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 183.089 | 190.064 | 130.523 | 603.83 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.9416 | 15.7034 | 16.0586 | 13.9118 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.2516 | 6.44409 | 8.97567 | 14.1261 |
CDS Structure of MLOC_64388
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64388.11
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g20420.1 |
+3 |
0.0 |
1137 |
554/677 (82%) |
13103.m02449 protein alpha-N-arabinofuranosidase A, putative, expressed |
| TAIR PP10 |
AT3G10740.1 |
+3 |
0.0 |
782 |
387/659 (59%) |
| Symbols: ASD1, ARAF1, ARAF, ATASD1 | alpha-L-arabinofuranosidase 1 | chr3:3361031-3364573 REVERSE LENGTH=678 |
