MLOC_64379 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.57148.4912910.14818.30043
LEAShoots from the seedlings (10 cm shoot stage)3.647290.5433511.958761.72348
INF1Young developing inflorescences (5mm)5.421316.552588.161464.55947
INF2Developing inflorescences (1-1.5 cm)3.653273.912624.526363.62357
ROORoots from the seedlings (10 cm shoot stage)6.333135.004615.754345.509
NODDeveloping tillers at six leaf stage, 3rd internode2.109372.101634.097087.13477
CAR5Developing grain, bracts removed (5 DPA)3.241893.549644.301052.84404
CAR15Developing grain, bracts removed (15 DPA)0.6361451.019410.8595361.55391



CDS Structure of MLOC_64379






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64379.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64379.2CUST_8711_PI427708083AvailableAvailablecontig_48743 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g02890.1 +2 0.0 572 284/300 (95%) 13101.m00229 protein phosphatidylserine synthase, putative
TAIR PP10 AT1G15110.1 +2 1e-176 506 236/299 (79%) phosphatidyl serine synthase family protein | chr1:5199594-5201908 FORWARD LENGTH=425