MLOC_64374 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.952761.511871.753141.60807
LEAShoots from the seedlings (10 cm shoot stage)5.5204810.41388.493856.3248
INF1Young developing inflorescences (5mm)3.102143.546914.365763.05842
INF2Developing inflorescences (1-1.5 cm)7.93155.90486.698987.20866
ROORoots from the seedlings (10 cm shoot stage)2.015341.91071.965722.10073
NODDeveloping tillers at six leaf stage, 3rd internode2.36061.782731.491514.47394
CAR5Developing grain, bracts removed (5 DPA)4.720576.741375.380235.30975
CAR15Developing grain, bracts removed (15 DPA)1.16181.133731.221482.7019



CDS Structure of MLOC_64374






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64374.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357984NoneNoneNoneNone
MLOC_64374.3CUST_18293_PI427708080AvailableAvailablecontig_48722 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g35440.1 +1 4e-92 303 168/290 (58%) 13108.m03717 protein Ser/Thr protein phosphatase family protein, putative, expressed
TAIR PP10 AT2G29400.1 +1 4e-92 303 175/323 (54%) | Symbols: TOPP1, PP1-AT | type one protein phosphatase 1 | chr2:12613789-12615283 REVERSE LENGTH=318