MLOC_64351 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.784523.083827.373324.2952
LEAShoots from the seedlings (10 cm shoot stage)4.368873.661980.6920482.47455
INF1Young developing inflorescences (5mm)1.180980.8707921.211360.910652
INF2Developing inflorescences (1-1.5 cm)3.481042.16586.18193.86979
ROORoots from the seedlings (10 cm shoot stage)1.903349.874952.978979.98284
NODDeveloping tillers at six leaf stage, 3rd internode0.100710.04445240.02992720.145651
CAR5Developing grain, bracts removed (5 DPA)3.180533.114823.497593.22696
CAR15Developing grain, bracts removed (15 DPA)5.523892.675056.0766610.8137



CDS Structure of MLOC_64351






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64351.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367848NoneNoneNoneNone
MLOC_64351.2CUST_4955_PI427708080AvailableAvailablecontig_48701 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g12660.1 -2 0.0 1172 695/843 (82%) 13101.m01371 protein AAA-type ATPase family protein, putative, expressed
TAIR PP10 AT1G64110.3 -2 0.0 958 539/810 (67%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:23796887-23801255 REVERSE LENGTH=827