MLOC_64334 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.908823.259521.54422.458
LEAShoots from the seedlings (10 cm shoot stage)28.293624.556330.926919.8536
INF1Young developing inflorescences (5mm)38.555941.420236.45127.246
INF2Developing inflorescences (1-1.5 cm)32.26339.840731.864831.7283
ROORoots from the seedlings (10 cm shoot stage)23.919327.22622.658524.0098
NODDeveloping tillers at six leaf stage, 3rd internode9.1891912.459618.380833.9678
CAR5Developing grain, bracts removed (5 DPA)55.494957.796160.594843.931
CAR15Developing grain, bracts removed (15 DPA)42.61635.726432.779569.9765



CDS Structure of MLOC_64334






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64334.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64334.1CUST_12947_PI427708083AvailableAvailablecontig_48662 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g32030.1 -1 6e-119 382 187/195 (96%) 13102.m03460 protein elongation factor, putative, expressed
TAIR PP10 AT1G56070.1 -1 7e-113 365 176/195 (90%) | Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843