MLOC_64329 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains98.9548203.152173.536148.797
LEAShoots from the seedlings (10 cm shoot stage)147.33265.842163.673177.4486
INF1Young developing inflorescences (5mm)128.884117.24591.726185.6075
INF2Developing inflorescences (1-1.5 cm)82.015193.772285.07184.3579
ROORoots from the seedlings (10 cm shoot stage)63.0826126.68285.8153122.393
NODDeveloping tillers at six leaf stage, 3rd internode104.6575.585337.7893220.987
CAR5Developing grain, bracts removed (5 DPA)164.935146.311157.476132.45
CAR15Developing grain, bracts removed (15 DPA)36.564830.505430.635365.0943



CDS Structure of MLOC_64329






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64329.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64329.3CUST_17790_PI427708080AvailableAvailablecontig_48653 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g01380.1 +1 0.0 1963 1039/1066 (97%) 13111.m00048 protein clathrin heavy chain, putative, expressed
TAIR PP10 AT3G08530.1 +1 0.0 1866 969/1066 (91%) Clathrin, heavy chain | chr3:2587171-2595411 REVERSE LENGTH=1703