MLOC_64326 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.135828.985038.620048.83019
LEAShoots from the seedlings (10 cm shoot stage)7.057045.775517.030275.72281
INF1Young developing inflorescences (5mm)25.173623.814224.429920.5766
INF2Developing inflorescences (1-1.5 cm)22.790823.386823.449125.9141
ROORoots from the seedlings (10 cm shoot stage)5.053419.892168.0294711.0923
NODDeveloping tillers at six leaf stage, 3rd internode0.353550.7544542.293743.38082
CAR5Developing grain, bracts removed (5 DPA)10.840410.482811.875510.9983
CAR15Developing grain, bracts removed (15 DPA)4.756014.097843.642099.88547



CDS Structure of MLOC_64326






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64326.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64326.1CUST_14672_PI427708080AvailableAvailablecontig_48651 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g01990.1 +3 0.0 970 488/563 (87%) 13105.m00147 protein DEAD-box ATP-dependent RNA helicase, putative, expressed
TAIR PP10 AT2G40700.1 +3 0.0 683 339/556 (61%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:16976783-16979392 FORWARD LENGTH=609