MLOC_64305 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.03342430.02791310.1887750.0879326
LEAShoots from the seedlings (10 cm shoot stage)47.700653.762438.289240.6411
INF1Young developing inflorescences (5mm)0.0441289000.0404057
INF2Developing inflorescences (1-1.5 cm)0.0231764000.0289101
ROORoots from the seedlings (10 cm shoot stage)0.2495731.231240.9885311.4708
NODDeveloping tillers at six leaf stage, 3rd internode30.538219.475711.968652.2406
CAR5Developing grain, bracts removed (5 DPA)10.601512.910914.371414.6951
CAR15Developing grain, bracts removed (15 DPA)0.2270750.1435420.090610.434343



CDS Structure of MLOC_64305






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64305.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357384NoneNoneNoneNone
MLOC_64305.1CUST_4949_PI427708080AvailableAvailablecontig_48619 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g32650.1 -3 0.0 713 362/394 (92%) 13111.m03183 protein chalcone synthase, putative, expressed
TAIR PP10 AT5G13930.1 -3 0.0 643 322/393 (82%) | Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395