MLOC_64294 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.078118.136616.889817.001
LEAShoots from the seedlings (10 cm shoot stage)28.04328.580436.128225.0985
INF1Young developing inflorescences (5mm)25.770628.435626.698521.9155
INF2Developing inflorescences (1-1.5 cm)30.057628.622231.741630.7565
ROORoots from the seedlings (10 cm shoot stage)23.832223.830121.182526.2586
NODDeveloping tillers at six leaf stage, 3rd internode14.55820.177917.579263.3031
CAR5Developing grain, bracts removed (5 DPA)28.071229.449429.158726.0553
CAR15Developing grain, bracts removed (15 DPA)15.855915.433914.602133.5275



CDS Structure of MLOC_64294






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64294.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252067.1NoneNoneNoneNone
MLOC_64294.1CUST_4947_PI427708080AvailableAvailablecontig_48602 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40420.1 -2 0.0 628 399/451 (88%) 13101.m04139 protein CBS domain containing membrane protein, putative, expressed
TAIR PP10 AT1G69800.1 -2 3e-133 403 263/430 (61%) Cystathionine beta-synthase (CBS) protein | chr1:26274416-26276105 REVERSE LENGTH=447