MLOC_64293 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0470732000.0333986
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.1170730.03478320.1116290.0738704
INF2Developing inflorescences (1-1.5 cm)0.03003200.03599430.0602686
ROORoots from the seedlings (10 cm shoot stage)0.0880734000.0363577
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)10.57998.877658.281559.02751
CAR15Developing grain, bracts removed (15 DPA)0.02604490.1237330.112860.244304



CDS Structure of MLOC_64293






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64293.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64293.1CUST_14666_PI427708080AvailableAvailablecontig_48602 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g30010.1 +1 2e-19 89 59/166 (36%) 13109.m02987 protein fasciclin domain containing protein, expressed
TAIR PP10 AT4G12730.1 +1 1e-14 76 51/170 (30%) | Symbols: FLA2 | FASCICLIN-like arabinogalactan 2 | chr4:7491598-7492809 REVERSE LENGTH=403