MLOC_64241 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.08185.558525.832585.32137
LEAShoots from the seedlings (10 cm shoot stage)3.125490.3411031.865581.51122
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)9.058816.692514.6337.46442
NODDeveloping tillers at six leaf stage, 3rd internode17.585827.65710.026818466.8714
CAR5Developing grain, bracts removed (5 DPA)00.046222700.0509359
CAR15Developing grain, bracts removed (15 DPA)00.044641300.122043



CDS Structure of MLOC_64241






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64241.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64241.1CUST_14658_PI427708080AvailableAvailablecontig_48536 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41690.1 -1 4e-59 197 135/197 (69%) 13112.m04356 protein membrane associated DUF588 domain containing protein, putative, expressed
TAIR PP10 AT5G44550.1 -1 8e-27 107 57/132 (43%) Uncharacterised protein family (UPF0497) | chr5:17942100-17943174 REVERSE LENGTH=197