MLOC_64240 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.67347.8287710.540111.9185
LEAShoots from the seedlings (10 cm shoot stage)3.410084.14757.366365.2571
INF1Young developing inflorescences (5mm)0.04205150.02404890.02766790.03151
INF2Developing inflorescences (1-1.5 cm)00.02216510.03019520.0711407
ROORoots from the seedlings (10 cm shoot stage)22.604218.928425.847832.4253
NODDeveloping tillers at six leaf stage, 3rd internode0.03689520.1183930.5438540.719424
CAR5Developing grain, bracts removed (5 DPA)2.771653.026472.875043.54404
CAR15Developing grain, bracts removed (15 DPA)8.400198.203836.3019422.7203



CDS Structure of MLOC_64240






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64240.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250475.1NoneNoneNoneNone
MLOC_64240.2CUST_4942_PI427708080AvailableAvailablecontig_48536 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41680.1 +2 4e-134 394 232/308 (75%) 13112.m04355 protein No apical meristem protein, putative, expressed
TAIR PP10 AT1G56010.2 +2 2e-73 237 113/174 (65%) | Symbols: NAC1, ANAC022 | NAC domain containing protein 1 | chr1:20946852-20949144 REVERSE LENGTH=324