- Predicted Gene MLOC_64240
MLOC_64240 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.6734 | 7.82877 | 10.5401 | 11.9185 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.41008 | 4.1475 | 7.36636 | 5.2571 |
INF1 | Young developing inflorescences (5mm) | 0.0420515 | 0.0240489 | 0.0276679 | 0.03151 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0221651 | 0.0301952 | 0.0711407 |
ROO | Roots from the seedlings (10 cm shoot stage) | 22.6042 | 18.9284 | 25.8478 | 32.4253 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0368952 | 0.118393 | 0.543854 | 0.719424 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.77165 | 3.02647 | 2.87504 | 3.54404 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.40019 | 8.20383 | 6.30194 | 22.7203 |
CDS Structure of MLOC_64240
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64240.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g41680.1 |
+2 |
4e-134 |
394 |
232/308 (75%) |
13112.m04355 protein No apical meristem protein, putative, expressed |
TAIR PP10 |
AT1G56010.2 |
+2 |
2e-73 |
237 |
113/174 (65%) |
| Symbols: NAC1, ANAC022 | NAC domain containing protein 1 | chr1:20946852-20949144 REVERSE LENGTH=324 |