MLOC_64235 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains75.649868.100377.434779.8866
LEAShoots from the seedlings (10 cm shoot stage)131.65543.597778.912267.6481
INF1Young developing inflorescences (5mm)0.8081460.5498830.4837820.581721
INF2Developing inflorescences (1-1.5 cm)1.395040.8510211.436061.48172
ROORoots from the seedlings (10 cm shoot stage)62.675554.097240.592463.6519
NODDeveloping tillers at six leaf stage, 3rd internode198.98110.526131.519276.938
CAR5Developing grain, bracts removed (5 DPA)9.022868.574199.2489710.2768
CAR15Developing grain, bracts removed (15 DPA)3.409364.444623.6237411.1212



CDS Structure of MLOC_64235






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64235.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248368.1NoneNoneNoneNone
MLOC_64235.1CUST_4941_PI427708080AvailableAvailablecontig_48528 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g04380.1 +2 0.0 535 261/314 (83%) 13105.m00439 protein peroxidase precursor, putative, expressed
TAIR PP10 AT4G33420.1 +2 1e-57 198 114/310 (37%) Peroxidase superfamily protein | chr4:16084856-16086105 FORWARD LENGTH=325