MLOC_64204 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains418.479328.261324.524367.392
LEAShoots from the seedlings (10 cm shoot stage)114.5325.079939.552249.6602
INF1Young developing inflorescences (5mm)94.7513109.552135.144106.081
INF2Developing inflorescences (1-1.5 cm)46.874737.753854.296753.5495
ROORoots from the seedlings (10 cm shoot stage)405.461317.444301.166394.465
NODDeveloping tillers at six leaf stage, 3rd internode73.534544.849535.7337122.902
CAR5Developing grain, bracts removed (5 DPA)102.875104.461117.589117.672
CAR15Developing grain, bracts removed (15 DPA)32.413226.098128.137674.8458



CDS Structure of MLOC_64204






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64204.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249492.1NoneNoneNoneNone
MLOC_64204.1CUST_4934_PI427708080AvailableAvailablecontig_48497 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g40270.1 +1 0.0 667 307/337 (91%) 13103.m04360 protein alpha-1,4-glucan-protein synthase, putative, expressed
TAIR PP10 AT3G02230.1 +1 0.0 655 306/350 (87%) | Symbols: RGP1, ATRGP1 | reversibly glycosylated polypeptide 1 | chr3:415463-417304 FORWARD LENGTH=357