MLOC_64199 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.724426.407096.753067.1681
LEAShoots from the seedlings (10 cm shoot stage)00.03287970.03333210.0570852
INF1Young developing inflorescences (5mm)00.016318600.0194078
INF2Developing inflorescences (1-1.5 cm)0.0145365000.0182763
ROORoots from the seedlings (10 cm shoot stage)5.661594.831983.138335.38294
NODDeveloping tillers at six leaf stage, 3rd internode0.2563770.4455950.009480530.919198
CAR5Developing grain, bracts removed (5 DPA)0.1778530.2892470.3872690.32306
CAR15Developing grain, bracts removed (15 DPA)0.01226760.1019470.01764090.150786



CDS Structure of MLOC_64199






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64199.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365006NoneNoneNoneNone
MLOC_64199.3CUST_18290_PI427708080AvailableAvailablecontig_48466 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22600.1 -3 0.0 920 531/681 (78%) 13103.m02723 protein BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
TAIR PP10 AT1G03010.1 -3 0.0 669 371/667 (56%) Phototropic-responsive NPH3 family protein | chr1:693480-696188 FORWARD LENGTH=634