MLOC_64195 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.961668.36097.880327.11057
LEAShoots from the seedlings (10 cm shoot stage)9.371657.572488.362177.18188
INF1Young developing inflorescences (5mm)15.519514.811716.563912.5849
INF2Developing inflorescences (1-1.5 cm)22.117818.918919.912621.2401
ROORoots from the seedlings (10 cm shoot stage)4.656127.666126.334368.40301
NODDeveloping tillers at six leaf stage, 3rd internode4.01546.819897.9151122.2344
CAR5Developing grain, bracts removed (5 DPA)9.759539.5677110.17259.07931
CAR15Developing grain, bracts removed (15 DPA)5.235054.653895.7260810.8494



CDS Structure of MLOC_64195






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64195.14
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252785.1NoneNoneNoneNone
AK354747NoneNoneNoneNone
MLOC_64195.14CUST_4933_PI427708080AvailableAvailablecontig_48487 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g13630.1 +3 0.0 846 447/597 (75%) 13109.m01253 protein ZOS9-03 - C2H2 zinc finger protein, expressed
TAIR PP10 AT5G51230.1 +3 4e-166 501 296/628 (47%) | Symbols: EMF2, VEF2, CYR1, AtEMF2 | VEFS-Box of polycomb protein | chr5:20824153-20829344 FORWARD LENGTH=631