- Predicted Gene MLOC_64195
MLOC_64195 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.96166 | 8.3609 | 7.88032 | 7.11057 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.37165 | 7.57248 | 8.36217 | 7.18188 |
INF1 | Young developing inflorescences (5mm) | 15.5195 | 14.8117 | 16.5639 | 12.5849 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.1178 | 18.9189 | 19.9126 | 21.2401 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.65612 | 7.66612 | 6.33436 | 8.40301 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.0154 | 6.81989 | 7.91511 | 22.2344 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.75953 | 9.56771 | 10.1725 | 9.07931 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.23505 | 4.65389 | 5.72608 | 10.8494 |
CDS Structure of MLOC_64195
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64195.14
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g13630.1 |
+3 |
0.0 |
846 |
447/597 (75%) |
13109.m01253 protein ZOS9-03 - C2H2 zinc finger protein, expressed |
TAIR PP10 |
AT5G51230.1 |
+3 |
4e-166 |
501 |
296/628 (47%) |
| Symbols: EMF2, VEF2, CYR1, AtEMF2 | VEFS-Box of polycomb protein | chr5:20824153-20829344 FORWARD LENGTH=631 |