MLOC_64190 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.02391250.021991900.0293261
LEAShoots from the seedlings (10 cm shoot stage)0.8234042.445722.933351.75305
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.474490.489950.2021690.555408
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.0652101000.087811
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_64190






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64190.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64190.1CUST_14647_PI427708080AvailableAvailablecontig_48473 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35004.1 +3 1e-164 496 297/625 (48%) 13107.m03576 protein TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed
TAIR PP10 AT4G23270.1 +3 1e-98 322 224/611 (37%) | Symbols: CRK19 | cysteine-rich RLK (RECEPTOR-like protein kinase) 19 | chr4:12171133-12173794 FORWARD LENGTH=645