MLOC_64189 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.383611.164610.627113.4092
LEAShoots from the seedlings (10 cm shoot stage)5.341830.7149721.30252.29676
INF1Young developing inflorescences (5mm)37.10637.068331.172235.1577
INF2Developing inflorescences (1-1.5 cm)31.657744.464629.805948.9555
ROORoots from the seedlings (10 cm shoot stage)3.290657.191315.8335710.5665
NODDeveloping tillers at six leaf stage, 3rd internode0.7421360.4100480.0694861.41892
CAR5Developing grain, bracts removed (5 DPA)15.243116.542716.702419.4653
CAR15Developing grain, bracts removed (15 DPA)1.092330.3558761.041722.11718



CDS Structure of MLOC_64189






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64189.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64189.3CUST_14646_PI427708080AvailableAvailablecontig_48473 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56540.1 +2 0.0 1015 622/857 (73%) 13102.m06497 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT4G14330.1 +2 2e-168 520 402/881 (46%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:8244228-8247286 FORWARD LENGTH=869