- Predicted Gene MLOC_64183
MLOC_64183 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.4338 | 19.6179 | 19.5465 | 19.1403 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.3248 | 35.5856 | 28.0552 | 23.8592 |
| INF1 | Young developing inflorescences (5mm) | 11.0628 | 14.864 | 18.3565 | 12.891 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.1708 | 11.2771 | 12.7008 | 13.3516 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 32.5519 | 28.7993 | 24.5218 | 34.5914 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.2488 | 36.9128 | 26.2742 | 109.995 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.4527 | 14.7523 | 14.2336 | 15.25 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.36573 | 2.69359 | 2.3677 | 6.20423 |
CDS Structure of MLOC_64183
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64183.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17240.1 |
-3 |
0.0 |
1053 |
606/696 (87%) |
13103.m02060 protein ankyrin repeat-containing protein, putative, expressed |
| TAIR PP10 |
AT3G12360.1 |
-3 |
0.0 |
740 |
404/543 (74%) |
| Symbols: ITN1 | Ankyrin repeat family protein | chr3:3934146-3936495 FORWARD LENGTH=590 |
