- Predicted Gene MLOC_64156
MLOC_64156 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.16586 | 2.36117 | 2.08418 | 2.01954 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.1475 | 6.2403 | 8.39762 | 6.98335 |
| INF1 | Young developing inflorescences (5mm) | 1.26298 | 1.40809 | 1.02344 | 1.07515 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.670011 | 0.698707 | 0.993914 | 0.868161 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0433904 | 0.365525 | 0.384025 | 0.386039 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.39863 | 7.44853 | 8.38249 | 24.3831 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.02984 | 2.87451 | 2.75692 | 3.21744 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0696186 | 0.178083 | 0.150523 | 0.31714 |
CDS Structure of MLOC_64156
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64156.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g19734.1 |
-1 |
0.0 |
893 |
454/548 (83%) |
13109.m01855 protein isochorismate synthase 1, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G18870.1 |
-1 |
0.0 |
561 |
288/517 (56%) |
| Symbols: ICS2, ATICS2 | isochorismate synthase 2 | chr1:6515486-6519176 FORWARD LENGTH=562 |
