- Predicted Gene MLOC_64149
MLOC_64149 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.0578 | 7.90762 | 8.2536 | 9.14751 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.92655 | 5.72022 | 7.95374 | 5.932 |
| INF1 | Young developing inflorescences (5mm) | 6.53806 | 7.69108 | 7.86127 | 6.72789 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.97487 | 6.40594 | 6.35631 | 7.32866 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.9035 | 8.6609 | 8.05663 | 10.6629 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.37926 | 12.0107 | 11.276 | 37.2728 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.54586 | 10.3679 | 9.52173 | 10.0443 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.37828 | 2.24089 | 2.23027 | 5.90698 |
CDS Structure of MLOC_64149
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64149.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g40700.1 |
+3 |
4e-114 |
352 |
279/363 (77%) |
13103.m04395 protein presenilin, putative, expressed |
| TAIR PP10 |
AT2G29900.1 |
+3 |
2e-58 |
202 |
142/283 (50%) |
| Symbols: PS2 | Presenilin-2 | chr2:12749837-12751030 FORWARD LENGTH=397 |
